Publications

Retrouvez dans cette section l'ensemble des articles et rapports scientifiques réalisés par les membres du RAQ ainsi que les thèses et mémoires produits par les diplomés du regroupement.

Articles scientifiques 2012

  • Yossa R., P.K. Sarker, S. Karanth, M. Ekker & G.W. Vandenberg. 2012. Effects of dietary biotin and avidin on growth, survival, feed conversion, biotin status and gene expression of zebrafish Danio rerio (Hamilton-Buchanan). Comparative Physiology and Biochemistry Part B : Biochemistry and Molecular Biology 160(4) :150-158
  • Yossa R., P.K. Sarker & G.W. Vandenberg. 2012. Preliminary evidence of the contribution of the intestinal microflora to biotin supply in zebrafish Danio rerio (Hamilton-Buchanan). Zebrafish 8(4) : 221-227
  • Villeneuve C, Martineau C, Mauffrey F, Villemur R . 2012. Complete genome sequences of the Methylophaga sp. strain JAM1 and Methylophaga sp. strain JAM7. Genome announcement. J. Bacteriol. 194 (15):4126-4127.
  • Valancin, Srinivasan, Rivoal, M. Jolicoeur. Analyzing the effect of decreasing cytosolic triosephosphate isomerase on solanum tuberosum hairy root cells using a kinetic-metabolic model. Submitted (07/06/2012) to the Biotechnology and Bioengineering Journal
  • Valancin A., B. Srinivasan, J. Rivoal, M. Jolicoeur. 2012. Analyzing the effect of decreasing cytosolic triosephosphate isomerase on solanum tuberosum hairy root cells using a kinetic-metabolic model. Submitted (07/06/2012) to the Biotechnology and Bioengineering Journal
  • Tremblay, R., Landry, T., Leblanc, N., Pernet, F., Barkhouse, C., Sévigny, J.-M. 2011. Physiological and biochemical indicator of mussel seeds quality. Aquatic Living Ressources 24: 273–282.
  • Tremblay V, Larocque-Tobler I, Sirois P (2010) Historical variability of subfossil chironomids (Diptera: Chironomidae) in three lakes impacted by natural and anthropogenic disturbances. J Paleolimnology 44:483-495
  • Toupoint, N., Gilmore-Solomon, L., Bourque, F., Myrand, B., Pernet, F., Olivier, F., Tremblay, R. 2012. Match/mismatch between larval supply of Mytilus edulis and seston quality: incidence on recruitment. Sous presse dans Ecology.
  • Toupoint N, Mohit V, Linossier I, Bourgougnon N, Myrand B, Lovejoy C, Olivier F, Tremblay R. 2012. Effect of the biofilm age on Mytilus edulis settlement. Biofouling, 28:985-1001.
  • Tanaka K.H., Dallaire-Dufresne S., Daher R.K., Frenette M. and Charette S.J. (2012) An Insertion Sequence-Dependent Plasmid Rearrangement in Aeromonas salmonicida Causes the Loss of the Type Three Secretion System. PLoS One, 7(3): e33725.
  • Tamdrari H., J.-C. Brêthes, M. Castonguay & D. Duplisea 2012. Homing and group cohesion in Atlantic cod Gadus morhua revealed by tagging experiments Journal of Fish Biology 81: 714–727.
  • Stewart DT, Jha M, Breton S, Hoeh WR, et Blier PU. No effect of sperm interactions or egg homogenate on sperm velocity in the blue mussel, Mytilus edulis (Bivalvia: Mytilidae). Can J Zool
  • Snelgrove PVR, Archambault P, Juniper SK, Lawton P, Metaxas A, Pepin P, Rice JC, Tunnicliffe V. 2012. The Canadian Healthy Oceans Network (CHONe): An academic-government partnership to develop scientific guidelines in support of conservation and sustainable usage of Canada’s marine biodiversity. Fisheries, 37:296-304.
  • Séguin Heine M-O, Arnold AA, Leblanc A, Sleno L, Myrand B, Tremblay R, Marcotte. 2012. Contenu en métaux et marquage isotopique au 13C du byssus de la moule bleue, Mytilus edulis. AAC Spec Publ, 20: 59-62.
  • Sauvage C., M. Vagner, N. Derôme, C. Audet & L. Bernatchez. 2012. Coding gene SNP mapping reveals GTL linked to growth and stress response in brook charr ( Salvelinus fontinalis ). G3: Genes, genomes, genetics. 2: 707-720.
  • Sauvage C, Vagner M, Derome N, Audet C, Bernatchez L. 2012. Coding gene SNP mapping and QTL detection for physiological reproductive traits in brook charr, Salvelinus fontinalis . G3 Genes Genomes Genetics. 2: 379-392
  • Robichaud LM, McKindsey CW, Archambault P, Desrosiers G (soumis mai 2012) Influence of suspended mussel aquaculture and an associated invasive ascidian on macroinvertebrate communities. Aquaculture Environment Interactions.(soumis)
  • Renn SCP, Fraser EJ, Aubin-Horth N, Trainor BC, Hofmann HA. 2012. Females of an African cichlid fish display male-typical behavior and elevated testosterone in the absence of males. Hormones and Behavior, 61: 496-503.
  • Renaut S., N. Maillet, E. Normandeau, C. Sauvage, N. Derome, S.M. Rogers & L. Bernatchez. 2012. The genetic basis of species boundaries: the lake whitefish case study. Philosophical Transactions of the Royal Society of London. 367 : 354-363
  • Puigagut, J., Chazarenc, F., Comeau, Y. 2012. Influence of tubificid worms on nutrients and organic matter fluxes between fish farming sediments and overlaying water. Soumis à Chemosphere . Mars.
  • Plourde J, Sirois P, Trudel M (2011) Quantifying zooplankton consumption by larval and juvenile rainbow smelt using a mercury mass balance model. In : Enterline C, Wood C, Mills K, Chase BC, Verreault G, Fischer J, Ayer MH (Eds) Extended Abstract Proceedings of the Fourth North American Workshop on Rainbow Smelt. Maine Department of Marine Resources, New Hampshire Department of Fish & Game, Massachusetts Division of Marine Fisheries
  • Pigeon L.-É. & L. Létourneau. 2012. La problématique éthique du développement de l’aquaculture industrielle au Canada : analyse mésologique d’un nouveau rapport possible à l’océan. Revue VertigÔ (soumis en août 2012).
  • Pichaud, N., Rioux, P., & Blier, P. U. 2012. In situ quantification of mitochondrial respiration in permeabilized fibers of a marine invertebrate with low aerobic capacity. Comparative Biochemistry and Physiology - A Molecular and Integrative Physiology, 161(4), 429-435.
  • Pelletier, F. and D. Garant. 2012. Population consequences of individual variation in behaviour. Chap 12. In Behavioural responses to a changing world . Eds Candolin, U. and B. Wong. Oxford University Press. 304 p.
  • Pavey S, Bernatchez L, Aubin-Horth N, Landry C. What is needed for next-generation ecological genomics? Trends in Ecology and Evolution. (soumis)
  • Paradis V, Sirois P, Castonguay M, Plourde S. 2012. Spatial variability in zooplankton and feeding of larval Atlantic mackerel ( Scomber scombrus ) in the southern Gulf of St. Lawrence. J Plankton Res, 34 :1064-1077.
  • Myrand, B., L. Chevarie, R. Tremblay. 2012. Benthic spat collection of soft-shell clams ( Mya arenaria Linnaeus, 1758) using mats. Sous presse dans Journal of Shellfish Research.
  • Munro, D., & Blier, P. U. (2012). The extreme longevity of Arctica islandica is associated with increased peroxidation resistance in mitochondrial membranes. Aging Cell. Doi: 10.1111/j.1474-9726.2012.00847.x.
  • Mejri. S., Tremblay, R., Lambert, Y., Audet, C. 2012. Influence of different levels of dissolved oxygen on the success of Greenland halibut ( Reinhardtius hippoglosoides ) egg hatching and embryonic development. Sous presse dans Marine Biology 159 : 1693-1701
  • McKindsey, CW, Archambault, P, Simard, N (2012) Spatial variation of benthic infaunal communities in baie de Gapsé (eastern Canada) – influence of mussel aquaculture. Aquaculture 356–357: 48–54
  • Marie A, Bernatchez L., Garant D. 2012. Environmental determinants of hybridization in stocked brook charr ( Salvelinus fontinalis ). Canadian Journal of Fisheries and Aquatic Sciences. 69: 884–893
  • Létourneau L. 2012. « Animal Justice : Understanding the implications of Animal Biotechnology for Animal Welfare and Animal Rights », dans C. Brunk et S. Hartley (dir.), Designer Animals : Mapping the Issues in Animal Biotechnology, Toronto, University of Toronto Press, 2012, pp. 189-209
  • Leclerc V, Sirois P. Discriminating the influence of environmental conditions, growth-selective survival and potential for growth at hatching on early growth in yellow perch ( Perca flavescens ) populations. Soumis le 3 juin 2012 à Transactions American Fisheries Society
  • Leblanc, A., A. Arnold, B. Genard, J.-B. Nadalini, M.-O. Seguin-Heine, I. Marcotte, R. Tremblay, L. Sleno. 2012. Determination of isotopic labeling of proteins by precursor ion scanning liquid chromatography tandem mass spectrometry of derivatized amino acids applied to nuclear magnetic resonance studies. Rapid Communication in Mass Spectrometry, 2012, 26, 1165-1174.
  • Le Floc'h P, Daures F, Guyader O, Wilson J. 2012. A Case study of technological switching and technological lock-in in the french fisheries sector: why is sustainable change so difficult? Canadian Journal of Agricultural Economics, 60(4): 427-576.
  • Largaespada C, Guichard F, Archambault P (2012) Meta-ecosystems engineering: Nutrient fluxes reveal intra-specific and inter-specific feedbacks in fragmented mussel beds. Ecology 93: 324–333
  • Laplante K, Boutin S, Derome N. 2012. Parallel changes of taxonomic interaction networks in lacustrine bacterial communities induced by a polymetallic perturbation. Ev App, 6:643-659.
  • Laplante K and N Derome. Convergent changes in the taxonomical structure of microbial communities exposed to a similar environmental disturbance. Ecology and Evolution . In press.
  • Lamaze FC, Marie A, Garant D, Bernatchez L. 2012. Dynamics of introgressive hybridization assessed by coding genes SNP population genomics in stocked brook charr ( Salvelinus fontinalis ). Molecular Ecology. 21: 2877–2895
  • Lacasse J, Aubin-Horth N. 2012. A test of the coupling of predator defense morphology and behavior in two threespine stickleback populations. Current Zoology, 58: 53-65.
  • Khan N, Qureshi NA, Nasir M, Vandenberg GW, Mughal MS, Maqbool A, Jabbar MA, Zikria N. 2012. Effect of artificial feed on sensory attributes of Indian major carps ( Labeo rohita, Catla catla and Cirrhinus mrigala ) fed in monoculture and polyculture systems. Pakistan Veterinary Journal, 32(3): 349-353.
  • Khan N, Ashraf M, Qureshi NA, Sarker PK, Vandenberg GW, Rasool F. 2012. Effect of similar feeding regime on growth and body composition of Indian major carps ( Catla catla, Cirrhinus mrigala and Labeo rohita ) under mono and polyculture. African Journal of Biotechnology, 11(44): 10280-10290.
  • Grant C., P. Archambault, F. Olivier & C.W. McKindsey. 2012. Influence of mussel culture on the benthic environment in a dynamic intertidal system. Aquaculture Environment Interactions 2:117-131
  • Glaz P, Nozais C, Sirois P, Archambault, Gagné J-P. Impact of forest harvesting on water quality and fluorescence characteristics of dissolved organic matter in eastern Canadian Boreal Shield lakes. Soumis en août 2012 à Hydrobiologia
  • Glaz P, Nozais C, Sirois P (sous presse) Using stable isotope analysis to identify diet breadth and sizerelated shifts of brook trout ( Salvelinus fontinalis ) in Eastern Canadian Boreal Shield lakes. Aquat Biol
  • Genard, B., R. Tremblay, F. Pernet, D. Élise, P. Boudry, D. Moraga. 2012. Molecular to physiological view of premetamorphic development in American oyster Crassostrea virginica in relation to massive mortality event. Gene 499 : 70-75.
  • Gagné, R., R. Tremblay, F. Olivier, F. Pernet, P. Miner, J.-F. Samain. 2012. Effect of diet on detachment of scallop Pecten maximus post-larvae due to flow velocity. Accepté dans Aquaculture.
  • Gagnaire PA, Normandeau E, Cote C, Hansen MM, Bernatchez L. 2012. The genetic consequences of spatially varying selection in panmixia: more transient than stable polymorphisms in the American eel ( Anguilla rostrata ). Genetics. 190: 725-736.
  • Gagnaire P-A, Normandeau E, Bernatchez L. 2012. Comparative genomics reveals adaptive protein evolution and a possible cytonuclear incompatibility between European and American eels. Molecular Biology and Evolution. doi:10.1093/molbev/mss076 Advance Access publication February 23, 2012
  • Friesen, C.N., N. Aubin-Horth & L.J. Chapman. 2012. The effect of hypoxia on sex hormones in an African cichlid, Pseudocrenilabrus multicolour Victoria. Comparative Biochemistry and Physiology Part A. 162: 22-30
  • Friesen, C.N., L.J. Chapman & N. Aubin-Horth. Holding water hormones in the African cichlid fish Pseudocrenulabrus multicolor victoriae. General and Comparative Endocrinology. (Soumis)
  • Fréchette, M. 2012. Self-thinning, biodeposit production, and organic matter input to the bottom in mussel suspension culture. Journal of Sea Research 67: 10-20.
  • Fréchette, M. 2012. A model of clearance rate regulation in mussels. J. Sea Res. 73:32-40. DOI: 10.1016/j.seares.2012.06.005
  • Duffy, S., M. Granados, C.W. McKindsey & G.F. Fussmann. 2012. Modified intraguild predation facilitates the persistence of intraguild prey in a mussel aquaculture system. Submitted to Oikos
  • Dommange, Tanguy, Jolicoeur*. A study on the feasibility of viable lipid excretion from Monoraphidium minutum using mechanical stress. Submitted (16/05/2012) to the Biotechnology Research International Journal, for a Special issue on invitation on Bioenergy and Biorefinery
  • Dommange X., P. Tanguy, M. Jolicoeur. 2012. A study on the feasibility of viable lipid excretion from Monoraphidium minutum using mechanical stress. Submitted (16/05/2012) to the Biotechnology Research International Journal, for a Special issue on invitation on Bioenergy and Biorefinery
  • Deschênes J-S, St-Onge P., Collin J-C, Tremblay R. 2012. Extremum seeking control of batch cultures of microalgae Nannochloropsis oculata in pre-industrial scale PBRs. International Federation of Automatic Control (IFAC), 8(1): 585-590.
  • Demontigny F, Ouellet P, Sirois P, Plourde S (2012) Zooplankton prey selection among three dominant ichthyoplankton species in the northwest Gulf of St. Lawrence. J Plankton Res 34:221-235
  • Debes P, Normandeau E, Fraser D, Bernatchez L, Hutchings, J. 2012. Differences in transcription levels among wild, domesticated and hybrid Atlantic salmon ( Salmo salar ) from two environments. Molecular Ecology. 21: 2574–2587
  • Cuddy M, Aubin-Horth N, Krahe R. 2012. Electrocommunication behavior and non invasively-measured androgen changes following induced seasonal breeding in the weakly electric fish, Apteronotus leptorhynchus. Hormones and Behavior, 61: 4-11.
  • Crespel A., L. Bernatchez, D. Garant & C. Audet. 2011. Quantitative genetic analysis of the physiological stress response of three brook charr, Salvelinus fontinalis (Mitchill), strains and their hybrids. Journal of Fish Biology. 79: 2019-2033
  • Crespel A., C. Audet, L. Bernatchez & D. Garant. 2012. Effects of rearing environment and strain combination on heterosis in brook charr ( Salvelinus fontinalis ). North American Journal of Aquaculture. 74: 188-198
  • Crespel A, Bernatchez L, Audet C, D Garant. Population-specific genotype–environment interactions and evolutionary potential for body mass in brook charr (Salvelinus fontinalis). G3: Genes, genomes, genetics. (soumis)
  • Colbeck G, Turgeon J, Sirois P, Dodson J (2011) Historical introgression and the role of selective processes in structuring nuclear genetic variation (AFLP) in a circumpolar marine fish, the capelin ( Mallotus villosus ). Mol Ecol 20:1976-1987
  • Claveau-Mallet, D., Wallace, S., Comeau, Y. 2012. Model of phosphorus precipitation and crystal formation in electric arc furnace steel slag filters. Environmental Science & Technology, 46 : 1465-1470.
  • Charette, S.J., Brochu F., Boyle B., Fillion G., Tanaka K.H. & N. Derome. 2012. Draft Genome Sequence of the virulent strain 01-B526 of the fish pathogen Aeromonas salmonicida . J. Bact 194: 722-723
  • Boutin S., L. Bernatchez, C. Audet & N. Derôme. 2012. Antagonistic effect of skin bacteria of brook charr ( Salvelinus fontinalis ) against Flavobacterium columnare and F. psychrophilum . Veterinary Microbiology. 155: 355-361
  • Boutin S, Savellec M, Pavey S, Bernatchez L, Derome N. A fast, highly sensitive method to screen fish immunobiomes. Molecular Ecology Resources. (sous presse)
  • Boulet M, Normandeau E, Bougas B, Audet C, Bernatchez L. 2012. Comparative Transcriptomics of Anadromous and Resident Brook Charr ( Salvelinus fontinalis ) before their First Salt Water Transition. Current Zoology. 58: 155-167.
  • Benchabane S., M. Subirade & G.W. Vandenberg. 2007. Production of BSA-loaded alginate microcapsules: influence of spray dryer parameters on the microcapsule characteristics and BSA release. Journal of Microencapsulation 24(7): 647-658.
  • Auclair J., Parent S. et Villemur R. 2012. Functional diversity in the denitrifying biofilm of the methanol-fed marine denitrification system at the Montreal Biodome. Microbial Ecology 63:726–735
  • Auclair J, Lépine F, Villemur R. 2012. A liquid chromatography-mass spectrometry method to measure 13-C isotope incorporation for DNA-stable isotope probing. Can. J. Microbiol. 58(3):287-292.
  • Aubin-Horth N., M. Deschênes & S. Cloutier. 2012. Natural variation in the molecular stress response is correlated to a behavioural syndrome. Hormones and Behavior. 61: 140-146.
  • Arnold A.A., Genard B., Nadalini J.-B., Seguin-Heine M.-O., Marcotte I., Tremblay R., Sleno L. 2012. Determination of isotopic labeling of proteins by precursor ion scanning liquid chromatography tandem mass spectrometry of derivatized amino acids applied to nuclear magnetic resonance studies. Rapid Communication in Mass Spectrometry, 26: 1165-1174.
  • Anouk Simard, M., Paquet, A., Jutras, C., Robitaille, Y., Blier, P, Courtois, R., & Martel, A. L. 2012. North american range extension of the invasive asian clam in a st. Lawrence river power station thermal plume. Aquatic Invasions, 7(1), 81-89.